STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM86927.1Putrescine transport system permease protein. (304 aa)    
Predicted Functional Partners:
SFL41359.1
Putrescine transport system permease protein.
  
 0.985
SFM86946.1
Putrescine transport system permease protein.
 
  
 0.968
potA
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 0.966
SFM18804.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.927
SFM93844.1
Sorbitol ABC transporter ATP-binding protein/mannitol ABC transporter ATP-binding protein.
 0.925
SFL83559.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 0.922
SFL81245.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.921
SFM44117.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 0.920
SFL81306.1
Putative chitobiose transport system permease protein.
  
 0.910
SFL83527.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
  
 0.910
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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