Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LSS_03344Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (113 aa)    
Predicted Functional Partners:
LSS_03339
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
LSS_03334
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.618
LSS_03349
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.610
LSS_03324
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.569
LSS_03329
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.569
LSS_03314
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.446
LSS_03319
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.446
LSS_03299
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.443
LSS_03304
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.443
LSS_03309
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.443
Your Current Organism:
Leptospira santarosai
NCBI taxonomy Id: 758847
Other names: L. santarosai serovar Shermani str. LT 821, Leptospira santarosai serovar Shermani LT 821, Leptospira santarosai serovar Shermani str. ATCC 43286, Leptospira santarosai serovar Shermani str. LT 821, Leptospira santarosai serovar Shermani strain LT 821
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