Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LSS_03429Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)    
Predicted Functional Partners:
LSS_01962
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
LSS_16096
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
LSS_11590
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
LSS_08024
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
LSS_12137
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
LSS_09219
GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.522
LSS_05011
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.518
LSS_19048
Peptidase M15A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.512
LSS_19243
Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.436
LSS_15506
Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
Your Current Organism:
Leptospira santarosai
NCBI taxonomy Id: 758847
Other names: L. santarosai serovar Shermani str. LT 821, Leptospira santarosai serovar Shermani LT 821, Leptospira santarosai serovar Shermani str. ATCC 43286, Leptospira santarosai serovar Shermani str. LT 821, Leptospira santarosai serovar Shermani strain LT 821
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