Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LSS_03479Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)    
Predicted Functional Partners:
LSS_21015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.572
LSS_14281
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.535
LSS_10238
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.509
LSS_09853
Carbohydrate-binding module 48; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.501
LSS_12799
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
LSS_23060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.483
LSS_06090
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.474
LSS_03634
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.455
LSS_02569
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.443
LSS_11690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.438
Your Current Organism:
Leptospira santarosai
NCBI taxonomy Id: 758847
Other names: L. santarosai serovar Shermani str. LT 821, Leptospira santarosai serovar Shermani LT 821, Leptospira santarosai serovar Shermani str. ATCC 43286, Leptospira santarosai serovar Shermani str. LT 821, Leptospira santarosai serovar Shermani strain LT 821
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