Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LSS_08049Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
LSS_08059
Endoflagellar motor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.823
LSS_08064
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.813
LSS_08054
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.806
LSS_13454
Peptidase inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.454
LSS_07529
Cyclic diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
LSS_12844
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
LSS_10368
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
LSS_10443
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
LSS_21960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
LSS_06165
c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
Your Current Organism:
Leptospira santarosai
NCBI taxonomy Id: 758847
Other names: L. santarosai serovar Shermani str. LT 821, Leptospira santarosai serovar Shermani LT 821, Leptospira santarosai serovar Shermani str. ATCC 43286, Leptospira santarosai serovar Shermani str. LT 821, Leptospira santarosai serovar Shermani strain LT 821
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