STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHE95331.1Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
AHE95329.1
DsrE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.928
AHE95323.1
Heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.921
AHE95325.1
Heterodisulfide reductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.920
AHE95326.1
Disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.906
AHE95322.1
Heterodisulfide reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.887
AHE95321.1
Heterodisulfide reductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.867
AHE96284.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.857
gcvH-2
Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
     0.853
AHE96234.1
Lipoate--protein ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.826
gcvH
Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
     0.785
Your Current Organism:
Thermocrinis ruber
NCBI taxonomy Id: 75906
Other names: DSM 23557, T. ruber, strain OC 1/4, strain OC 14/7/2
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