STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHE95834.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (659 aa)    
Predicted Functional Partners:
AHE96766.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.853
AHE95848.1
TonB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.785
AHE96884.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.785
AHE96605.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.591
AHE96063.1
DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
AHE95641.1
TonB-denpendent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
AHE96405.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
AHE95481.1
Protein-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
AHE95640.1
Polyferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.537
mutS2
DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.531
Your Current Organism:
Thermocrinis ruber
NCBI taxonomy Id: 75906
Other names: DSM 23557, T. ruber, strain OC 1/4, strain OC 14/7/2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.