STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHE95988.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (619 aa)    
Predicted Functional Partners:
AHE96802.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.922
AHE96803.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.741
AHE95989.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.642
AHE95990.1
UDP-N-acetyl-D-galactosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.630
AHE96804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.613
AHE95985.1
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.583
AHE96801.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.527
AHE95987.1
Glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
AHE95986.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.505
AHE95984.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.485
Your Current Organism:
Thermocrinis ruber
NCBI taxonomy Id: 75906
Other names: DSM 23557, T. ruber, strain OC 1/4, strain OC 14/7/2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.