STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHE96015.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)    
Predicted Functional Partners:
AHE96069.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.663
mazG
Nucleoside triphosphate pyrophosphohydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.638
AHE96016.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
AHE96013.1
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.568
AHE96012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AHE96812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.563
AHE96813.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.563
corA
Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.563
AHE96122.1
Nitrogen-fixing protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.528
AHE95852.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.521
Your Current Organism:
Thermocrinis ruber
NCBI taxonomy Id: 75906
Other names: DSM 23557, T. ruber, strain OC 1/4, strain OC 14/7/2
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