STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHE96084.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa)    
Predicted Functional Partners:
AHE96085.1
Acetoin utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
       0.773
AHE96083.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
AHE96082.1
Thiosulfate-binding protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
AHE96087.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
AHE96088.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiD family.
       0.528
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
       0.502
AHE96081.1
Sulfur oxidation protein SoxZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.447
AHE96838.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.437
Your Current Organism:
Thermocrinis ruber
NCBI taxonomy Id: 75906
Other names: DSM 23557, T. ruber, strain OC 1/4, strain OC 14/7/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.