Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHE95508.1 | AHE96158.1 | THERU_01200 | THERU_05240 | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
| AHE95508.1 | AHE96612.1 | THERU_01200 | THERU_07875 | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.619 |
| AHE95508.1 | recG | THERU_01200 | THERU_00055 | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.458 |
| AHE95664.1 | AHE96158.1 | THERU_02130 | THERU_05240 | Primosomal protein N; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.631 |
| AHE95664.1 | AHE96612.1 | THERU_02130 | THERU_07875 | Primosomal protein N; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.937 |
| AHE96158.1 | AHE95508.1 | THERU_05240 | THERU_01200 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
| AHE96158.1 | AHE95664.1 | THERU_05240 | THERU_02130 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Primosomal protein N; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.631 |
| AHE96158.1 | AHE96160.1 | THERU_05240 | THERU_05250 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
| AHE96158.1 | AHE96475.1 | THERU_05240 | THERU_07095 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.510 |
| AHE96158.1 | AHE96612.1 | THERU_05240 | THERU_07875 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.605 |
| AHE96158.1 | gpsA | THERU_05240 | THERU_05235 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.813 |
| AHE96158.1 | murB | THERU_05240 | THERU_06200 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.507 |
| AHE96158.1 | murC | THERU_05240 | THERU_05245 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.788 |
| AHE96158.1 | purQ | THERU_05240 | THERU_01825 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in [...] | 0.517 |
| AHE96158.1 | recG | THERU_05240 | THERU_00055 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.559 |
| AHE96160.1 | AHE96158.1 | THERU_05250 | THERU_05240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
| AHE96160.1 | gpsA | THERU_05250 | THERU_05235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.537 |
| AHE96160.1 | murC | THERU_05250 | THERU_05245 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.537 |
| AHE96475.1 | AHE96158.1 | THERU_07095 | THERU_05240 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.510 |
| AHE96475.1 | AHE96612.1 | THERU_07095 | THERU_07875 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.540 |
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