STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHE96332.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)    
Predicted Functional Partners:
AHE96330.1
Small GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
AHE95458.1
Gliding motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.922
AHE96213.1
Mutual gliding-motility protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.922
AHE96331.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
AHE96333.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
AHE96334.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.702
AHE96335.1
RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.
       0.508
rpmI
50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.
       0.498
Your Current Organism:
Thermocrinis ruber
NCBI taxonomy Id: 75906
Other names: DSM 23557, T. ruber, strain OC 1/4, strain OC 14/7/2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.