STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHE96359.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (621 aa)    
Predicted Functional Partners:
AHE96276.1
FeS cluster assembly scaffold IscU; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.912
AHE96599.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.779
AHE96660.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.739
AHE95520.1
General secretion pathway protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.738
groS
Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
    
  0.707
AHE96035.1
6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.695
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.688
AHE95623.1
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.679
ogg
DNA lyase; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites); Belongs to the type-2 OGG1 family.
  
     0.648
AHE96407.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
Your Current Organism:
Thermocrinis ruber
NCBI taxonomy Id: 75906
Other names: DSM 23557, T. ruber, strain OC 1/4, strain OC 14/7/2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.