Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHE95409.1 | AHE96633.1 | THERU_00665 | THERU_07980 | Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
| AHE95409.1 | AHE96634.1 | THERU_00665 | THERU_07985 | Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.503 |
| AHE95409.1 | AHE96637.1 | THERU_00665 | THERU_08010 | Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.528 |
| AHE96310.1 | AHE96633.1 | THERU_06145 | THERU_07980 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.901 |
| AHE96631.1 | AHE96632.1 | THERU_07970 | THERU_07975 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.825 |
| AHE96631.1 | AHE96633.1 | THERU_07970 | THERU_07980 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |
| AHE96631.1 | AHE96634.1 | THERU_07970 | THERU_07985 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.786 |
| AHE96631.1 | AHE96635.1 | THERU_07970 | THERU_08000 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.503 |
| AHE96631.1 | AHE96637.1 | THERU_07970 | THERU_08010 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
| AHE96631.1 | AHE96638.1 | THERU_07970 | THERU_08015 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| AHE96631.1 | hemA | THERU_07970 | THERU_08005 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.462 |
| AHE96631.1 | truB | THERU_07970 | THERU_07965 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.786 |
| AHE96632.1 | AHE96631.1 | THERU_07975 | THERU_07970 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.825 |
| AHE96632.1 | AHE96633.1 | THERU_07975 | THERU_07980 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.793 |
| AHE96632.1 | AHE96634.1 | THERU_07975 | THERU_07985 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.890 |
| AHE96632.1 | AHE96635.1 | THERU_07975 | THERU_08000 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.524 |
| AHE96632.1 | AHE96637.1 | THERU_07975 | THERU_08010 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| AHE96632.1 | AHE96638.1 | THERU_07975 | THERU_08015 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| AHE96632.1 | hemA | THERU_07975 | THERU_08005 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.494 |
| AHE96632.1 | truB | THERU_07975 | THERU_07965 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.815 |
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