Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHE95541.1 | AHE96634.1 | THERU_01430 | THERU_07985 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| AHE95628.1 | AHE96634.1 | THERU_01925 | THERU_07985 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| AHE95769.1 | AHE96634.1 | THERU_02690 | THERU_07985 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| AHE95846.1 | AHE96634.1 | THERU_03180 | THERU_07985 | enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.914 |
| AHE95846.1 | acpP | THERU_03180 | THERU_06150 | enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.950 |
| AHE96429.1 | AHE96634.1 | THERU_06845 | THERU_07985 | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.943 |
| AHE96631.1 | AHE96632.1 | THERU_07970 | THERU_07975 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.825 |
| AHE96631.1 | AHE96633.1 | THERU_07970 | THERU_07980 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |
| AHE96631.1 | AHE96634.1 | THERU_07970 | THERU_07985 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.786 |
| AHE96631.1 | truB | THERU_07970 | THERU_07965 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.786 |
| AHE96632.1 | AHE96631.1 | THERU_07975 | THERU_07970 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.825 |
| AHE96632.1 | AHE96633.1 | THERU_07975 | THERU_07980 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.793 |
| AHE96632.1 | AHE96634.1 | THERU_07975 | THERU_07985 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.890 |
| AHE96632.1 | truB | THERU_07975 | THERU_07965 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.815 |
| AHE96633.1 | AHE96631.1 | THERU_07980 | THERU_07970 | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.767 |
| AHE96633.1 | AHE96632.1 | THERU_07980 | THERU_07975 | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.793 |
| AHE96633.1 | AHE96634.1 | THERU_07980 | THERU_07985 | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.869 |
| AHE96633.1 | truB | THERU_07980 | THERU_07965 | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.767 |
| AHE96634.1 | AHE95541.1 | THERU_07985 | THERU_01430 | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| AHE96634.1 | AHE95628.1 | THERU_07985 | THERU_01925 | Biofilm PGA synthesis protein PgaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
page 1 of 2