Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0K0F0V4 | A0A0K0F5M6 | UPF0562 protein (inferred by orthology to a C. elegans protein). | Uncharacterized protein. | 0.477 |
A0A0K0F0V4 | A0A0K0F8P9 | UPF0562 protein (inferred by orthology to a C. elegans protein). | SET domain-containing protein. | 0.416 |
A0A0K0F0V4 | A0A0K0FIH2 | UPF0562 protein (inferred by orthology to a C. elegans protein). | tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. | 0.416 |
A0A0K0F0V4 | A0A0K0FUI0 | UPF0562 protein (inferred by orthology to a C. elegans protein). | Oxidoreductase-like domain-containing protein. | 0.447 |
A0A0K0F0V4 | A0A0K0G1I5 | UPF0562 protein (inferred by orthology to a C. elegans protein). | Uncharacterized protein. | 0.441 |
A0A0K0F0V4 | A0A0K0G3M2 | UPF0562 protein (inferred by orthology to a C. elegans protein). | PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.414 |
A0A0K0F0V4 | A0A0K0G3R1 | UPF0562 protein (inferred by orthology to a C. elegans protein). | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.590 |
A0A0K0F0V4 | A0A0K0G414 | UPF0562 protein (inferred by orthology to a C. elegans protein). | ATP synthase mitochondrial F1 complex assembly factor 2 (inferred by orthology to a human protein). | 0.614 |
A0A0K0F5M6 | A0A0K0F0V4 | Uncharacterized protein. | UPF0562 protein (inferred by orthology to a C. elegans protein). | 0.477 |
A0A0K0F8P9 | A0A0K0F0V4 | SET domain-containing protein. | UPF0562 protein (inferred by orthology to a C. elegans protein). | 0.416 |
A0A0K0F8P9 | A0A0K0FIH2 | SET domain-containing protein. | tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. | 0.426 |
A0A0K0F8P9 | A0A0K0G1I5 | SET domain-containing protein. | Uncharacterized protein. | 0.414 |
A0A0K0F8P9 | A0A0K0G3M2 | SET domain-containing protein. | PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.414 |
A0A0K0FIH2 | A0A0K0F0V4 | tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. | UPF0562 protein (inferred by orthology to a C. elegans protein). | 0.416 |
A0A0K0FIH2 | A0A0K0F8P9 | tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. | SET domain-containing protein. | 0.426 |
A0A0K0FUI0 | A0A0K0F0V4 | Oxidoreductase-like domain-containing protein. | UPF0562 protein (inferred by orthology to a C. elegans protein). | 0.447 |
A0A0K0FUI0 | A0A0K0G3R1 | Oxidoreductase-like domain-containing protein. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.598 |
A0A0K0G1I5 | A0A0K0F0V4 | Uncharacterized protein. | UPF0562 protein (inferred by orthology to a C. elegans protein). | 0.441 |
A0A0K0G1I5 | A0A0K0F8P9 | Uncharacterized protein. | SET domain-containing protein. | 0.414 |
A0A0K0G3M2 | A0A0K0F0V4 | PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | UPF0562 protein (inferred by orthology to a C. elegans protein). | 0.414 |
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