STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0F0V4UPF0562 protein (inferred by orthology to a C. elegans protein). (103 aa)    
Predicted Functional Partners:
A0A0K0G414
ATP synthase mitochondrial F1 complex assembly factor 2 (inferred by orthology to a human protein).
    
 
 0.614
A0A0K0G3R1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
    
   0.590
A0A0K0F5M6
Uncharacterized protein.
   
  
 0.477
A0A0K0FUI0
Oxidoreductase-like domain-containing protein.
   
   0.447
A0A0K0G1I5
Uncharacterized protein.
   
  
 0.441
A0A0K0F8P9
SET domain-containing protein.
      
 0.416
A0A0K0FIH2
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
      
 0.416
A0A0K0G3M2
PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
      
 0.414
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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