STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0F1W4Uncharacterized protein. (384 aa)    
Predicted Functional Partners:
A0A0K0FVK3
Uncharacterized protein.
    
 
 0.845
A0A0K0F8V0
Geranylgeranyl transferase type-2 subunit alpha (inferred by orthology to a human protein).
    
 0.834
A0A0K0F2G2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.736
A0A0K0FZ18
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.736
A0A0K0FAM2
Uncharacterized protein.
    
 
 0.698
A0A0K0FU40
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
     
 0.675
A0A0K0FDL4
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
      
 0.520
A0A0K0F7V5
Conserved regulator of innate immunity protein 3 (inferred by orthology to a C. elegans protein).
      
 0.516
A0A0K0FBU9
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
     
 0.497
A0A0K0FBW0
Numb-associated kinase (inferred by orthology to a D. melanogaster protein).
    
 
 0.461
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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