STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0F2H0Uncharacterized protein. (733 aa)    
Predicted Functional Partners:
A0A0K0G2A9
RNA polymerase-associated protein LEO1 (inferred by orthology to a human protein).
    
 0.893
A0A0K0F7T5
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.858
A0A0K0F226
Uncharacterized protein.
    
 0.849
A0A0K0F997
DNA-directed RNA polymerase II subunit RPB4 (inferred by orthology to a human protein).
    
 0.849
A0A0K0F9L1
DNA-directed RNA polymerase II subunit RPB3 (inferred by orthology to a human protein).
    
 0.849
A0A0K0FKW8
Uncharacterized protein.
    
 0.849
A0A0K0G3U4
Uncharacterized protein.
    
 0.849
A0A0K0F709
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.848
A0A0K0F912
DNA-directed RNA polymerase II subunit RPB7 (inferred by orthology to a human protein).
    
 0.848
A0A0K0FXR6
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.848
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.