STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0F6A6Probable histone-binding protein rba-1 (inferred by orthology to a C. elegans protein). (426 aa)    
Predicted Functional Partners:
A0A0K0EZK9
Integrase_H2C2 domain-containing protein.
    
 0.997
A0A0K0F9Y6
Histone demethylase UTY (inferred by orthology to a human protein).
   
 0.996
A0A0K0FC47
Histone acetyltransferase type B catalytic subunit (inferred by orthology to a human protein).
   
 0.996
A0A0K0FLH0
Uncharacterized protein.
   
 0.993
A0A0K0FU91
Protein lin-9 homolog (inferred by orthology to a human protein).
    
 0.993
A0A0K0G0K7
Protein lin-54 homolog (inferred by orthology to a human protein).
   
 0.989
A0A0K0G1E0
Retinoblastoma family protein (inferred by orthology to a D. melanogaster protein).
   
 0.986
A0A0K0FXK5
Uncharacterized protein.
   
 0.985
A0A0K0F8K4
Paired amphipathic helix protein Sin3b (inferred by orthology to a human protein).
   
 0.984
A0A0K0G041
MBD_C domain-containing protein.
    
 0.983
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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