STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0FBC0Putative ATP-dependent RNA helicase DHX30 (inferred by orthology to a human protein). (397 aa)    
Predicted Functional Partners:
A0A0K0FBB9
Probable ATP-dependent RNA helicase A (inferred by orthology to a C. elegans protein).
 
     0.862
A0A0K0F770
Uncharacterized protein.
   
 0.830
A0A0K0F4Z0
Pre-mRNA-processing factor 17 (inferred by orthology to a human protein).
   
 0.820
A0A0K0EU86
Small nuclear ribonucleoprotein Sm D2.
   
 0.814
A0A0K0F7I1
Small nuclear ribonucleoprotein Sm D3.
   
 0.809
A0A0K0FDP9
Probable small nuclear ribonucleoprotein F (inferred by orthology to a C. elegans protein); Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.803
A0A0K0F7U6
Polyadenylate-binding protein 2 (inferred by orthology to a D. melanogaster protein).
   
 0.802
A0A0K0G1T1
Sas10 domain-containing protein.
   
 0.802
A0A0K0FXK4
Small nuclear ribonucleoprotein G.
   
 0.799
A0A0K0F9M3
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.793
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.