A0A0K0FGA6 protein (Strongyloides venezuelensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0K0FGA6

Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family. (365 aa)

Predicted Functional Partners:

A0A0K0FV85

0.913

A0A0K0FN87

0.804

A0A0K0FGN3

0.784

A0A0K0FUI8

0.769

A0A0K0FZY9

0.725

A0A0K0FSA3

0.721

A0A0K0FSA4

0.703

A0A0K0F7W0

0.695

A0A0K0F6B4

0.678

A0A0K0G3U7

0.678

Your Current Organism:

Strongyloides venezuelensis

NCBI taxonomy Id: 75913
Other names: S. venezuelensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0K0F6B4	A0A0K0FGA6	Adrenodoxin-like protein, mitochondrial (inferred by orthology to a D. melanogaster protein).	Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family.	0.678
A0A0K0F6B4	A0A0K0FGN3	Adrenodoxin-like protein, mitochondrial (inferred by orthology to a D. melanogaster protein).	Cytochrome b5 reductase 4 (inferred by orthology to a human protein).	0.880
A0A0K0F6B4	A0A0K0FN87	Adrenodoxin-like protein, mitochondrial (inferred by orthology to a D. melanogaster protein).	Sulfite oxidase, mitochondrial (inferred by orthology to a human protein).	0.857
A0A0K0F6B4	A0A0K0FSA3	Adrenodoxin-like protein, mitochondrial (inferred by orthology to a D. melanogaster protein).	Cytochrome P450 4V2 (inferred by orthology to a human protein); Belongs to the cytochrome P450 family.	0.678
A0A0K0F6B4	A0A0K0FSA4	Adrenodoxin-like protein, mitochondrial (inferred by orthology to a D. melanogaster protein).	Uncharacterized protein.	0.678
A0A0K0F6B4	A0A0K0FUI8	Adrenodoxin-like protein, mitochondrial (inferred by orthology to a D. melanogaster protein).	Bis(5'-adenosyl)-triphosphatase.	0.754
A0A0K0F6B4	A0A0K0FV85	Adrenodoxin-like protein, mitochondrial (inferred by orthology to a D. melanogaster protein).	Uncharacterized protein.	0.619
A0A0K0F7W0	A0A0K0FGA6	Acyl-CoA synthetase family member 4 (inferred by orthology to a human protein).	Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family.	0.695
A0A0K0F7W0	A0A0K0FGN3	Acyl-CoA synthetase family member 4 (inferred by orthology to a human protein).	Cytochrome b5 reductase 4 (inferred by orthology to a human protein).	0.443
A0A0K0F7W0	A0A0K0FN87	Acyl-CoA synthetase family member 4 (inferred by orthology to a human protein).	Sulfite oxidase, mitochondrial (inferred by orthology to a human protein).	0.644
A0A0K0F7W0	A0A0K0FSA3	Acyl-CoA synthetase family member 4 (inferred by orthology to a human protein).	Cytochrome P450 4V2 (inferred by orthology to a human protein); Belongs to the cytochrome P450 family.	0.716
A0A0K0F7W0	A0A0K0FSA4	Acyl-CoA synthetase family member 4 (inferred by orthology to a human protein).	Uncharacterized protein.	0.716
A0A0K0F7W0	A0A0K0FV85	Acyl-CoA synthetase family member 4 (inferred by orthology to a human protein).	Uncharacterized protein.	0.904
A0A0K0FGA6	A0A0K0F6B4	Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family.	Adrenodoxin-like protein, mitochondrial (inferred by orthology to a D. melanogaster protein).	0.678
A0A0K0FGA6	A0A0K0F7W0	Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family.	Acyl-CoA synthetase family member 4 (inferred by orthology to a human protein).	0.695
A0A0K0FGA6	A0A0K0FGN3	Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family.	Cytochrome b5 reductase 4 (inferred by orthology to a human protein).	0.784
A0A0K0FGA6	A0A0K0FN87	Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family.	Sulfite oxidase, mitochondrial (inferred by orthology to a human protein).	0.804
A0A0K0FGA6	A0A0K0FSA3	Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family.	Cytochrome P450 4V2 (inferred by orthology to a human protein); Belongs to the cytochrome P450 family.	0.721
A0A0K0FGA6	A0A0K0FSA4	Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.703
A0A0K0FGA6	A0A0K0FUI8	Cytochrome P450 18a1 (inferred by orthology to a D. melanogaster protein); Belongs to the cytochrome P450 family.	Bis(5'-adenosyl)-triphosphatase.	0.769