STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0FIB6Phenylalanine--tRNA ligase beta subunit (inferred by orthology to a C. elegans protein). (591 aa)    
Predicted Functional Partners:
A0A0K0FFC9
Phenylalanine--tRNA ligase, mitochondrial (inferred by orthology to a human protein).
  
 0.998
A0A0K0FVB9
tRNA-synt_2d domain-containing protein.
  
 0.998
A0A0K0FVC2
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.998
A0A0K0F6T3
40S ribosomal protein S3 (inferred by orthology to a human protein).
  
 
 0.954
A0A0K0F9Q7
Leucine--tRNA ligase (projected from Caenorhabditis elegans ortholog lars-1); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.937
A0A0K0G4C9
Leucyl-tRNA synthetase (Mitochondrial) (projected from Caenorhabditis elegans ortholog lars-2); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.937
A0A0K0F1D6
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.931
A0A0K0F824
Isoleucine--tRNA ligase, cytoplasmic (inferred by orthology to a human protein); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.922
A0A0K0FV08
40S ribosomal protein S15 (inferred by orthology to a human protein); Belongs to the universal ribosomal protein uS19 family.
  
 
 0.920
A0A0K0FEA3
Isoleucyl-tRNA synthetase (Mitochondrial) (projected from Caenorhabditis elegans ortholog iars-2).
  
 
 0.905
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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