STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0FLB7Drosha (inferred by orthology to a D. melanogaster protein). (1075 aa)    
Predicted Functional Partners:
A0A0K0FYB1
Microprocessor complex subunit DGCR8 (inferred by orthology to a human protein).
   
 0.993
A0A0K0FAC8
Uncharacterized protein.
    
 0.976
A0A0K0FLQ7
Maternal effect protein staufen (inferred by orthology to a D. melanogaster protein).
    
 0.962
A0A0K0FAN7
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 0.936
A0A0K0FAN8
Helicase C-terminal domain-containing protein.
  
 0.936
A0A0K0F5Y8
Probable 40S ribosomal protein S9, mitochondrial (inferred by orthology to a C. elegans protein).
   
 
 0.935
A0A0K0F491
Uncharacterized protein.
   
 
 0.928
A0A0K0G2N2
Probable 39S ribosomal protein L19, mitochondrial (inferred by orthology to a C. elegans protein).
  
 
 0.927
A0A0K0EZL8
Uncharacterized protein.
  
 
 0.926
A0A0K0F511
39S ribosomal protein L17, mitochondrial (inferred by orthology to a human protein).
   
 
 0.921
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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