STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0FRR7CCHC-type domain-containing protein. (313 aa)    
Predicted Functional Partners:
A0A0K0F2V9
Heterogeneous nuclear ribonucleoprotein K (inferred by orthology to a human protein).
   
  
 0.876
A0A0K0FCR7
HABP4_PAI-RBP1 domain-containing protein.
   
 
 0.718
A0A0K0G1F6
Uncharacterized protein.
   
 
 0.676
A0A0K0EYD4
Putative ribosomal RNA methyltransferase (inferred by orthology to a C. elegans protein).
   
 
 0.629
A0A0K0FU67
Eukaryotic translation initiation factor 4H (inferred by orthology to a human protein).
   
 
 0.621
A0A0K0G0U0
60S ribosomal protein L27a (inferred by orthology to a human protein); Belongs to the universal ribosomal protein uL15 family.
   
 
 0.602
A0A0K0G175
60S ribosomal protein L4 (inferred by orthology to a C. elegans protein).
   
   0.567
A0A0K0FU14
Heterogeneous nuclear ribonucleoprotein A1 (projected from Caenorhabditis elegans ortholog hrp-1).
   
 
 0.563
A0A0K0F8Q5
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.549
A0A0K0F6T3
40S ribosomal protein S3 (inferred by orthology to a human protein).
   
 
 0.541
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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