STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0G0C5RRM domain-containing protein. (661 aa)    
Predicted Functional Partners:
A0A0K0F617
MIF4G domain-containing protein.
   
 0.977
A0A0K0FM90
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.953
A0A0K0FME9
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.953
A0A0K0FXR9
Pan3_PK domain-containing protein.
    
 0.953
A0A0K0EZM5
Eukaryotic initiation factor 4A-II (inferred by orthology to a human protein); Belongs to the DEAD box helicase family.
   
 0.931
A0A0K0FIG4
Ef1alpha-like factor (inferred by orthology to a D. melanogaster protein).
   
 0.913
A0A0K0FQU5
Ataxin-2 homolog (inferred by orthology to a D. melanogaster protein).
   
 
 0.910
A0A0K0FEU6
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.
   
 0.901
A0A0K0F7J2
Nuclear cap-binding protein subunit 1 (inferred by orthology to a C. elegans protein).
    
 0.893
A0A0K0G0D7
Eukaryotic translation initiation factor 3 subunit A.
   
 
 0.863
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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