STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0G0L9Rho GTPase activating protein at 15B (inferred by orthology to a D. melanogaster protein). (838 aa)    
Predicted Functional Partners:
A0A0K0F6D4
Arf-GAP domain-containing protein.
     
 0.862
A0A0K0EVA0
Ras-like GTP-binding protein Rho1 (inferred by orthology to a D. melanogaster protein).
    
 0.840
A0A0K0EVA1
Ras-like GTP-binding protein rhoA (inferred by orthology to a C. elegans protein).
    
 0.840
A0A0K0G0K0
Centaurin-gamma-1A (inferred by orthology to a D. melanogaster protein).
     
 0.836
A0A0K0FJ42
Ras-related protein Rap-1 (inferred by orthology to a C. elegans protein).
    
 0.831
A0A0K0EXH4
Centaurin beta 1A (projected from Caenorhabditis elegans ortholog cnt-1).
   
 0.824
A0A0K0G0J8
Uncharacterized protein.
     
 0.823
A0A0K0F9Y2
Uncharacterized protein.
    
 0.778
A0A0K0FGZ3
Uncharacterized protein.
    
 0.778
A0A0K0EWX0
Arf-GAP domain-containing protein.
     
 0.739
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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