STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K0G2A1ShKT domain-containing protein. (225 aa)    
Predicted Functional Partners:
A0A0K0F1D6
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.940
A0A0K0FX54
Nidogen/entactin (inferred by orthology to a D. melanogaster protein).
     
 0.756
A0A0K0EVY9
Rim (inferred by orthology to a D. melanogaster protein).
    
  0.727
A0A0K0FUP4
Nuclear pore glycoprotein p62 (inferred by orthology to a human protein).
    
 0.696
A0A0K0F7W3
Histone chaperone asf1 (inferred by orthology to a D. melanogaster protein).
    
 0.689
A0A0K0FI71
Histone chaperone asf1 (inferred by orthology to a D. melanogaster protein).
    
 0.689
A0A0K0FL11
Peroxidasin-like protein (inferred by orthology to a human protein).
    
 0.683
A0A0K0F7N5
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.663
A0A0K0ETX0
40S ribosomal protein S28 (inferred by orthology to a C. elegans protein).
   
   0.658
A0A0K0F098
NEDD8 (inferred by orthology to a D. melanogaster protein).
   
  0.658
Your Current Organism:
Strongyloides venezuelensis
NCBI taxonomy Id: 75913
Other names: S. venezuelensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.