STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB68836.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)    
Predicted Functional Partners:
ORB68834.1
Fluoroquinolone transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
BST47_02845
Polyketide antibiotic transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.732
ORB68837.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.647
ORB68835.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.595
ORB61853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
ORB63349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
ORB62809.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
ORB65301.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
ORB62790.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
ORB63350.1
RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
Your Current Organism:
Mycolicibacterium tusciae
NCBI taxonomy Id: 75922
Other names: CCUG 50996, CIP 106367, DSM 44338, JCM 12692, M. tusciae, Mycobacterium sp. FI-25796, Mycobacterium tusciae, strain FI-25796
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.