Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB67561.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
ORB67562.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.997
ORB68745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.776
ORB67906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
ORB68034.1
Acyl-[acyl-carrier-protein] thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
ORB64819.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
ORB65095.1
Pyrrolo-quinoline quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
ORB67785.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
ORB68915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
ORB61521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
lpqB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
Your Current Organism:
Mycolicibacterium tusciae
NCBI taxonomy Id: 75922
Other names: CCUG 50996, CIP 106367, DSM 44338, JCM 12692, M. tusciae, Mycobacterium sp. FI-25796, Mycobacterium tusciae, strain FI-25796
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