STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB66810.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (351 aa)    
Predicted Functional Partners:
ORB64318.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.844
ORB63959.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.788
ORB66811.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
ORB66812.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORB66813.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.689
ORB61800.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.619
ORB66814.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.543
ORB66273.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.530
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
    
  0.525
ORB67132.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.449
Your Current Organism:
Mycolicibacterium tusciae
NCBI taxonomy Id: 75922
Other names: CCUG 50996, CIP 106367, DSM 44338, JCM 12692, M. tusciae, Mycobacterium sp. FI-25796, Mycobacterium tusciae, strain FI-25796
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.