Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ORB64756.1 | ORB64757.1 | BST47_15830 | BST47_15835 | 1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.523 |
ORB64756.1 | ORB64758.1 | BST47_15830 | BST47_15840 | 1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.519 |
ORB64757.1 | ORB64756.1 | BST47_15835 | BST47_15830 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.523 |
ORB64757.1 | ORB64758.1 | BST47_15835 | BST47_15840 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.768 |
ORB64757.1 | ORB64759.1 | BST47_15835 | BST47_15845 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.523 |
ORB64758.1 | ORB64756.1 | BST47_15840 | BST47_15830 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.519 |
ORB64758.1 | ORB64757.1 | BST47_15840 | BST47_15835 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
ORB64758.1 | ORB64759.1 | BST47_15840 | BST47_15845 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
ORB64759.1 | ORB64757.1 | BST47_15845 | BST47_15835 | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.523 |
ORB64759.1 | ORB64758.1 | BST47_15845 | BST47_15840 | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.527 |