STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB63160.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)    
Predicted Functional Partners:
ORB63252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.924
ORB65740.1
DUF5130 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
ORB67617.1
RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
ORB61496.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
ORB64522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
ORB68849.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
rimP
Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.645
nusA
Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.
       0.645
ORB62983.1
DUF2470 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.623
ORB64394.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
Your Current Organism:
Mycolicibacterium tusciae
NCBI taxonomy Id: 75922
Other names: CCUG 50996, CIP 106367, DSM 44338, JCM 12692, M. tusciae, Mycobacterium sp. FI-25796, Mycobacterium tusciae, strain FI-25796
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.