STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB62889.1PPE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)    
Predicted Functional Partners:
ORB62890.1
WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
 0.921
ORB62882.1
ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.916
ORB62891.1
WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
 0.851
ORB62888.1
PE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.849
ORB62886.1
Type VII secretion protein EccCa; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.698
ORB62883.1
Secretion protein EspD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.582
ORB62885.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.467
ORB62887.1
Type VII secretion protein EccCb; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.465
ORB62884.1
Type VII secretion AAA-ATPase EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.434
ORB62892.1
Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.426
Your Current Organism:
Mycolicibacterium tusciae
NCBI taxonomy Id: 75922
Other names: CCUG 50996, CIP 106367, DSM 44338, JCM 12692, M. tusciae, Mycobacterium sp. FI-25796, Mycobacterium tusciae, strain FI-25796
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.