STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BST47_22595Thioredoxin reductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (761 aa)    
Predicted Functional Partners:
ORB62821.1
Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.931
BST47_29820
Immunogenic protein MPT63; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.863
ORB67570.1
Cation-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.849
ORB65294.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.768
ORB61728.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.768
ORB62784.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.718
ORB67849.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.442
ORB62364.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.442
ORB63908.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.419
Your Current Organism:
Mycolicibacterium tusciae
NCBI taxonomy Id: 75922
Other names: CCUG 50996, CIP 106367, DSM 44338, JCM 12692, M. tusciae, Mycobacterium sp. FI-25796, Mycobacterium tusciae, strain FI-25796
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.