STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB61974.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)    
Predicted Functional Partners:
ORB61988.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.
 
  
  0.969
ORB61394.1
Dihydrodipicolinate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.
 
  
  0.730
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
  0.613
ORB61962.1
4,5-dihydroxyphthalate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
ORB61435.1
Extradiol ring-cleavage dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.491
ORB61432.1
Aromatic ring-hydroxylating dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
ORB62506.1
5-dehydro-4-deoxyglucarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.
    
  0.458
ORB61426.1
Aromatic ring-hydroxylating dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
ORB61442.1
Aromatic ring-hydroxylating dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.410
ORB61403.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.408
Your Current Organism:
Mycolicibacterium tusciae
NCBI taxonomy Id: 75922
Other names: CCUG 50996, CIP 106367, DSM 44338, JCM 12692, M. tusciae, Mycobacterium sp. FI-25796, Mycobacterium tusciae, strain FI-25796
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