STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTHT_0051600Putative nuclear migration protein. (1448 aa)    
Predicted Functional Partners:
CTHT_0038360
VASt domain-containing protein.
    
 0.535
CTHT_0051850
Uncharacterized protein.
  
 
   0.462
CTHT_0053900
Uncharacterized protein.
  
  
  0.454
CTHT_0006990
Uncharacterized protein.
  
  
 0.418
CTHT_0043840
Uncharacterized protein.
  
  
  0.413
CTHT_0073790
Uncharacterized protein.
  
     0.404
CTHT_0059910
SLD3 domain-containing protein.
  
     0.402
Your Current Organism:
Chaetomium thermophilum
NCBI taxonomy Id: 759272
Other names: C. thermophilum var. thermophilum DSM 1495, Chaetomium thermophilum var. thermophilum DSM 1495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.