Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CH063_00298 | CH063_00600 | H1VFE3 | H1W149 | SNF2 super family protein. | Sister chromatid cohesion protein. | 0.543 |
CH063_00298 | CH063_06221 | H1VFE3 | H1V1S3 | SNF2 super family protein. | ATPase. | 0.529 |
CH063_00298 | CH063_06573 | H1VFE3 | H1V311 | SNF2 super family protein. | SNF2 super family protein. | 0.620 |
CH063_00298 | CH063_07222 | H1VFE3 | H1V5D4 | SNF2 super family protein. | TATA-box-binding protein. | 0.770 |
CH063_00298 | CH063_09158 | H1VFE3 | H1VCI8 | SNF2 super family protein. | Together with the TAF protein TBP belongs to the TFIID complex. | 0.770 |
CH063_00429 | CH063_06573 | H1VQM1 | H1V311 | Ring zinc finger protein. | SNF2 super family protein. | 0.624 |
CH063_00600 | CH063_00298 | H1W149 | H1VFE3 | Sister chromatid cohesion protein. | SNF2 super family protein. | 0.543 |
CH063_00600 | CH063_06573 | H1W149 | H1V311 | Sister chromatid cohesion protein. | SNF2 super family protein. | 0.586 |
CH063_02800 | CH063_06573 | H1VQ13 | H1V311 | Uncharacterized protein. | SNF2 super family protein. | 0.894 |
CH063_02800 | CH063_07222 | H1VQ13 | H1V5D4 | Uncharacterized protein. | TATA-box-binding protein. | 0.955 |
CH063_02800 | CH063_08999 | H1VQ13 | H1VBY2 | Uncharacterized protein. | Transcription factor TFIIB. | 0.628 |
CH063_02800 | CH063_09158 | H1VQ13 | H1VCI8 | Uncharacterized protein. | Together with the TAF protein TBP belongs to the TFIID complex. | 0.955 |
CH063_02800 | CH063_12315 | H1VQ13 | H1VPW0 | Uncharacterized protein. | Histone-like transcription factor and archaeal histone. | 0.990 |
CH063_06221 | CH063_00298 | H1V1S3 | H1VFE3 | ATPase. | SNF2 super family protein. | 0.529 |
CH063_06221 | CH063_06573 | H1V1S3 | H1V311 | ATPase. | SNF2 super family protein. | 0.576 |
CH063_06573 | CH063_00298 | H1V311 | H1VFE3 | SNF2 super family protein. | SNF2 super family protein. | 0.620 |
CH063_06573 | CH063_00429 | H1V311 | H1VQM1 | SNF2 super family protein. | Ring zinc finger protein. | 0.624 |
CH063_06573 | CH063_00600 | H1V311 | H1W149 | SNF2 super family protein. | Sister chromatid cohesion protein. | 0.586 |
CH063_06573 | CH063_02800 | H1V311 | H1VQ13 | SNF2 super family protein. | Uncharacterized protein. | 0.894 |
CH063_06573 | CH063_06221 | H1V311 | H1V1S3 | SNF2 super family protein. | ATPase. | 0.576 |
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