STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CH063_15107Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
CH063_00433
Spindle assembly checkpoint component MAD1.
    
 0.988
CH063_05472
Mitotic spindle checkpoint component mad3.
   
 0.987
CH063_14611
Checkpoint serine/threonine-protein kinase BUB1.
   
 0.987
CH063_02890
Tetratricopeptide.
    
 0.986
CH063_05305
WD repeat domain-containing protein.
   
 0.985
CH063_06700
Tetratricopeptide.
    
 0.985
CH063_00320
Anaphase-promoting complex component Cut20/Apc4.
    
 0.983
CH063_06663
Tetratricopeptide.
    
 0.978
CH063_01412
WD repeat domain-containing protein.
   
 0.973
CH063_01798
WD repeat domain-containing protein.
   
 0.973
Your Current Organism:
Colletotrichum higginsianum
NCBI taxonomy Id: 759273
Other names: C. higginsianum IMI 349063, Colletotrichum higginsianum IMI 349063
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.