STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIM63600.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
AIM63801.1
Hypothetical protein.
  
     0.745
AIM64066.1
Hypothetical protein.
  
     0.742
AIM63666.1
Hypothetical protein.
  
     0.741
AIM63899.1
Tetratricopeptide TPR_2 repeat protein.
  
     0.721
AIM64003.1
TPR repeat-containing protein.
  
     0.717
AIM64379.1
Hypothetical protein.
  
     0.717
mprF
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
     0.716
AIM63599.1
3-hydroxy-3-methylglutaryl coenzyme A reductase; Belongs to the HMG-CoA reductase family.
  
    0.659
AIM64376.1
Hypothetical protein.
  
     0.653
AIM64561.1
Hypothetical protein.
  
     0.622
Your Current Organism:
Weissella ceti
NCBI taxonomy Id: 759620
Other names: CCUG 59653, CECT 7719, W. ceti, Weissella ceti Vela et al. 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.