STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIM64301.1YbbL protein. (217 aa)    
Predicted Functional Partners:
AIM64300.1
ABC superfamily ATP binding cassette transporter, permease protein.
 
  
 0.963
AIM63699.1
ABC superfamily ATP binding cassette transporter ATP-binding and permease.
  
  
 
0.556
AIM64298.1
Peroxide operon transcriptional regulator; Belongs to the Fur family.
       0.548
AIM64299.1
Penicillin-binding protein.
       0.547
AIM64302.1
Halo peroxidase.
       0.539
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.405
Your Current Organism:
Weissella ceti
NCBI taxonomy Id: 759620
Other names: CCUG 59653, CECT 7719, W. ceti, Weissella ceti Vela et al. 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.