STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PxpBUnannotated protein. (138 aa)    
Predicted Functional Partners:
GCA_001312325_01046
Unannotated protein.
 0.999
PxpA
Unannotated protein.
 
 0.996
GCA_001312325_01048
Unannotated protein.
 
 
 0.980
GCA_001312325_01043
Unannotated protein.
  
  
 0.699
GCA_001312325_01032
Unannotated protein.
 
    0.648
GCA_001312325_01033
Unannotated protein.
  
    0.590
GCA_001312325_01638
Unannotated protein.
  
    0.556
GCA_001312325_04309
Unannotated protein.
  
    0.556
GCA_001312325_06905
Unannotated protein.
  
    0.556
GCA_001312325_06906
Unannotated protein.
  
    0.556
Your Current Organism:
Lysinibacillus pakistanensis
NCBI taxonomy Id: 759811
Other names: DSM 24784, JCM 18776, KCTC 13795, L. pakistanensis, Lysinibacillus pakistanensis Ahmed et al. 2014, Lysinibacillus sp. JCM 18776, Lysinibacillus sp. NCCP-54, strain NCCP-54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.