Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKA10533.1Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)    
Predicted Functional Partners:
AKA10535.1
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.950
hsdR_1
Restriction endonuclease EcoEI subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.920
hsdM_1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.895
AKA12710.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.714
AKA12489.1
Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.707
xerC_2
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
 
     0.646
hsdR_2
Restriction endonuclease HindVIIP subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.502
AKA10534.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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