STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA10534.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)    
Predicted Functional Partners:
AKA10360.1
ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.928
recG_1
ATP-dependent DNA helicase RecG; Catalyzes branch migration in Holliday junction intermediates; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AKA10535.1
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.791
hsdR_1
Restriction endonuclease EcoEI subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.633
AKA10533.1
Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.625
hsdR_2
Restriction endonuclease HindVIIP subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
    0.596
AKA12012.1
ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.510
hsdS-2
Restriction endonuclease HindVIIP subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.478
psd_1
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.462
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.