STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA10538.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)    
Predicted Functional Partners:
AKA11396.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.677
AKA11762.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.477
psd_1
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.466
AKA11761.1
Peptidase A24; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.441
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
     
 0.435
AKA11763.1
Pilus assembly protein PilB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.429
AKA10539.1
Opacity-associated protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.411
AKA12418.1
Type II secretory pathway, pseudopilin PulG; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.404
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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