Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKA10653.1 | AKA10654.1 | WC39_02775 | WC39_02780 | Periplasmic lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.898 |
| AKA10653.1 | rnhB | WC39_02775 | WC39_02785 | Periplasmic lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.757 |
| AKA10653.1 | rsgA | WC39_02775 | WC39_02790 | Periplasmic lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.757 |
| AKA10654.1 | AKA10653.1 | WC39_02780 | WC39_02775 | Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Periplasmic lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.898 |
| AKA10654.1 | leuS | WC39_02780 | WC39_08790 | Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational [...] | 0.435 |
| AKA10654.1 | rnhB | WC39_02780 | WC39_02785 | Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.764 |
| AKA10654.1 | rsgA | WC39_02780 | WC39_02790 | Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.763 |
| leuS | AKA10654.1 | WC39_08790 | WC39_02780 | leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational [...] | Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |
| rnhB | AKA10653.1 | WC39_02785 | WC39_02775 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Periplasmic lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| rnhB | AKA10654.1 | WC39_02785 | WC39_02780 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| rnhB | rsgA | WC39_02785 | WC39_02790 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.775 |
| rsgA | AKA10653.1 | WC39_02790 | WC39_02775 | GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Periplasmic lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| rsgA | AKA10654.1 | WC39_02790 | WC39_02780 | GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.763 |
| rsgA | rnhB | WC39_02790 | WC39_02785 | GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.775 |