Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKA10879.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)    
Predicted Functional Partners:
AKA10886.1
Lsg locus protein 4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.594
AKA10888.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.563
dapH
Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
neuB
N-acetyl neuramic acid synthetase NeuB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
AKA12291.1
Periplasmic/secreted protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
AKA10887.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.447
AKA10889.1
Amylovoran biosynthesis protein AmsE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.442
AKA10884.1
Lsg locus protein 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.430
AKA12499.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
neuC
Polyhydroxyalkanoate synthesis repressor PhaR; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.428
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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