Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKA11261.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (563 aa)    
Predicted Functional Partners:
narL_1
Nitrate/nitrite response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
arcB_3
Aerobic respiration control protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.806
yhaX
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ribBA_2
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the DHBP synthase family.
     
  0.727
ywnH
Sortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.623
fixL
Tetrathionate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.583
nreC
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.557
ompA_2
Plastocyanin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
fnr
Transcriptional regulator; Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.522
AKA11263.1
Nucleoside-triphosphate diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.508
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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