Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKA11544.1TP901 family phage tail tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)    
Predicted Functional Partners:
AKA12460.1
Mu-like prophage FluMu G protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.785
AKA12472.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.781
AKA12473.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
AKA12467.1
Tail sheath protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.771
AKA12474.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.768
AKA12475.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.768
AKA12476.1
Baseplate J protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.760
AKA12477.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.757
AKA10185.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.756
AKA12459.1
Head morphogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.749
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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