STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompHMembrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
ompA
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
 
 0.844
mlaA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.669
AKA11026.1
Peptidoglycan-associated outer membrane lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.628
AKA12299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.560
tolB_2
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.514
ompA_2
Plastocyanin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.437
AKA12086.1
GlcNAc transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.433
AKA12499.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.433
AKA11912.1
Heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.427
AKA10886.1
Lsg locus protein 4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.