Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKA11673.1Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)    
Predicted Functional Partners:
cpsD
Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
AKA11672.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.953
AKA11671.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.894
AKA11670.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.857
dnaB_1
DNA helicase; Unwinds double stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.780
AKA11642.1
Integrating conjugative element protein PilL, PFGI-1 class; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.779
AKA11606.1
Relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
AKA12734.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.777
AKA11792.1
Relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
AKA11810.1
Relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
Your Current Organism:
Mannheimia haemolytica
NCBI taxonomy Id: 75985
Other names: ATCC 33396, CCUG 12392, CCUG 408, CIP 103426, DSM 10531, M. haemolytica, NCTC 9380, Pasteurella haemolytica, strain J.A. Watt 1266AB
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